Differences
This shows you the differences between two versions of the page.
Both sides previous revision Previous revision Next revision | Previous revision | ||
webinars [2020/07/10 19:59] Aida Ouangraoua |
webinars [2024/03/20 19:49] Aida Ouangraoua |
||
---|---|---|---|
Line 1: | Line 1: | ||
- | ===== Online journal club ===== | + | ===== Online journal club (ISCB Academy webinars)===== |
ISCB and SMBE are collaborating to organize an online journal club (as part of the ISCBacademy series of webinars) on Evolution and Comparative Genomics. | ISCB and SMBE are collaborating to organize an online journal club (as part of the ISCBacademy series of webinars) on Evolution and Comparative Genomics. | ||
Line 5: | Line 5: | ||
The format of webinars is that abstract/papers are presented by their first author to promote presentations by young researchers, and questions and answers are exchanged throughout the presentation to value discussion and attendee input. | The format of webinars is that abstract/papers are presented by their first author to promote presentations by young researchers, and questions and answers are exchanged throughout the presentation to value discussion and attendee input. | ||
- | If you are interested in presenting, or you want to suggest an article of interest, please send an abstract to webinar@evolcompgen.org with “Abstract for Webinar” as the title of your message. | + | If you are interested in presenting, or you want to suggest an article of interest, please send an abstract to <webinar@evolcompgen.org> with “Abstract for Webinar” as the title of your message. |
Participation is free for any member of ISCB or SMBE, but registration is required. | Participation is free for any member of ISCB or SMBE, but registration is required. | ||
Line 11: | Line 11: | ||
===== Next webinar ===== | ===== Next webinar ===== | ||
- | **Monday August 24, 2020 at 11:00AM EDT**: | + | ** Date ** |
+ | |||
+ | **Title: ** | ||
+ | |||
+ | by ** Name ** (Institute) | ||
+ | |||
+ | Read the summary : [[]] | ||
+ | |||
+ | Read the article : [[]] | ||
+ | |||
+ | Registration : [[]] | ||
+ | |||
+ | |||
+ | ===== Past webinars ===== | ||
+ | |||
+ | ** Tuesday November 10, 2023 at 10:30AM EDT**: | ||
+ | |||
+ | **Title: Phylogenetic network estimation from site patterns using composite likelihood** | ||
+ | |||
+ | by **Sungsik Kong** (University of Wisconsin-Madison). | ||
+ | |||
+ | Read the summary : [[https://www.iscb.org/cms_addon/academy/history?year=2023#124]] | ||
+ | |||
+ | Read the article : https://www.biorxiv.org/content/10.1101/2022.11.14.516468v1.abstract | ||
+ | |||
+ | Watch the webinar : | ||
+ | |||
+ | -------------------- | ||
+ | |||
+ | ** Tuesday April 11, 2023 at 10:30AM EDT**: | ||
+ | |||
+ | **Title: Machine learning enables prediction of metabolic system evolution in bacteria** | ||
+ | |||
+ | by **Naoki Konno** (University of Tokyo). | ||
+ | |||
+ | Read the summary : [[https://www.iscb.org/cms_addon/academy/history?year=2023#102]] | ||
+ | |||
+ | Read the article : https://www.science.org/doi/full/10.1126/sciadv.adc9130 | ||
+ | |||
+ | Watch the webinar : https://www.youtube.com/watch?v=16aRqv15bOI | ||
+ | |||
+ | -------------------- | ||
+ | |||
+ | ** Tuesday November 1, 2022 at 10:30AM EDT**: | ||
+ | |||
+ | **Title: Accurate Identification of Transcription Regulatory Sequences and Genes in Coronaviruses** | ||
+ | |||
+ | by **Mohammed El-Kebir** (University of illinois). | ||
+ | |||
+ | Read the summary : [[https://www.iscb.org/cms_addon/academy/history?year=2022#84]] | ||
+ | |||
+ | Read the article : https://academic.oup.com/mbe/article/39/7/msac133/6608352 | ||
+ | |||
+ | Watch the webinar : https://www.youtube.com/watch?v=k8YwpMmv9lE | ||
+ | |||
+ | -------------------- | ||
+ | |||
+ | ** Wednesday April 12, 2022 at 10:30AM EDT**: | ||
+ | |||
+ | **Title: Combining evolution and proteomics to discover protein complexes conserved across plants** | ||
+ | |||
+ | by **Claire McWhite** (University of Texas at Austin). | ||
+ | |||
+ | Read the summary : [[https://www.iscb.org/cms_addon/academy/history?year=2022#64]] | ||
+ | |||
+ | Read the article : [[https://doi.org/10.1016/j.cell.2020.02.049]] | ||
+ | |||
+ | Watch the webinar : https://www.youtube.com/watch?v=bJzCYAi1guA | ||
+ | |||
+ | -------------------- | ||
+ | |||
+ | ** Tuesday November 2, 2021 at 11:00AM EDT**: | ||
+ | |||
+ | **Title: Scalable Inference of Phylogentetic Networks** | ||
+ | |||
+ | by **Claudia Solis-Lemus** (University of Wisconsin). | ||
+ | |||
+ | Read the summary : [[https://www.iscb.org/cms_addon/academy/history?year=2021#49]] | ||
+ | |||
+ | Read the articles : [[https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1005896]]; [[https://arxiv.org/abs/2010.01758]] | ||
+ | |||
+ | Watch the webinar : https://www.youtube.com/watch?v=J9HjsJ9PaGI | ||
+ | |||
+ | -------------------- | ||
+ | |||
+ | ** Thursday January 28, 2021 at 11:00AM EDT**: | ||
+ | |||
+ | **Title: SaGePhy: A phylogenetic simulation framework for gene and subgene evolution** | ||
+ | |||
+ | by **Soumya Kundu** (University of Connecticut). | ||
+ | |||
+ | Read the summary : [[https://www.iscb.org/cms_addon/academy/history?year=2021#32]] | ||
+ | |||
+ | Read the article : https://academic.oup.com/bioinformatics/article/35/18/3496/5305633 | ||
+ | |||
+ | Watch the webinar : https://www.youtube.com/watch?v=P8P_yDeInN4 | ||
+ | |||
+ | -------------------- | ||
+ | |||
+ | **Wednesday September 30, 2020 at 11:00AM EDT**: | ||
+ | |||
+ | **RAxML-NG: a fast, scalable and user-friendly tool for maximum likelihood phylogenetic inference** | ||
+ | |||
+ | by **Alexey Kozlov and Alexandros Stamatakis** (Heidelberg Institute for Theoretical Studies). | ||
+ | |||
+ | Read the summary : https://www.iscb.org/cms_addon/academy/history?year=2020#24 | ||
+ | |||
+ | Read the article : https://academic.oup.com/bioinformatics/article/35/21/4453/5487384 | ||
+ | |||
+ | Watch the webinar : https://www.youtube.com/watch?v=nSLVcgPfUUo | ||
+ | |||
+ | -------------------- | ||
+ | |||
+ | **Monday August 24, 2020**: | ||
**Unravelling the mystery of orphan genes to understand the origins of genetic novelty** | **Unravelling the mystery of orphan genes to understand the origins of genetic novelty** | ||
- | by **Nikos Vakirlis** (Alexander Fleming Biomedical Sciences Research Center). | + | presented by **Nikos Vakirlis** (Alexander Fleming Biomedical Sciences Research Center). |
- | Read the summary : https://www.iscb.org/iscbacademy-upcoming#vakirlis | + | Read the summary : https://www.iscb.org/cms_addon/academy/history?year=2020#22 |
Read the articles : https://doi.org/10.7554/eLife.53500 ; https://doi.org/10.1038/s41467-020-14500-z | Read the articles : https://doi.org/10.7554/eLife.53500 ; https://doi.org/10.1038/s41467-020-14500-z | ||
- | Registration : https://iscb.swoogo.com/iscbacademy-11-vakirlis | + | Watch the webinar : https://youtu.be/ScGPP19WWE8 |
- | ===== Past webinars ===== | + | -------------------- |
**Tuesday July 7, 2020**: | **Tuesday July 7, 2020**: | ||
Line 31: | Line 144: | ||
presented by **Malgorzata Gazda** (Universidade do Porto). | presented by **Malgorzata Gazda** (Universidade do Porto). | ||
- | Read the summary : https://www.iscb.org/iscbacademy-archive#gazda | + | Read the summary : https://www.iscb.org/cms_addon/academy/history?year=2020#18 |
Read the article : https://doi.org/10.1093/molbev/msaa006 | Read the article : https://doi.org/10.1093/molbev/msaa006 | ||
Line 45: | Line 158: | ||
presented by **Erfan Sayyari** (UCSD). | presented by **Erfan Sayyari** (UCSD). | ||
- | Read the summary : https://www.iscb.org/iscbacademy-archive#sayyari | + | Read the summary : https://www.iscb.org/cms_addon/academy/history?year=2020#14 |
Read the article : https://doi.org/10.1093/molbev/msw079 | Read the article : https://doi.org/10.1093/molbev/msw079 |