Differences

This shows you the differences between two versions of the page.

--- webinars [2022/04/13 13:35] – Aida Ouangraoua
+++ webinars [2024/10/14 18:24] (current) – [Past webinars] Alexey Markin
@@ Line 1: / Line 1: @@
-===== Online journal club =====
+===== Online journal club (ISCB Academy webinars)=====
 ISCB and SMBE are collaborating to organize an online journal club (as part of the ISCBacademy series of webinars) on Evolution and Comparative Genomics.
@@ Line 11: / Line 11: @@
 ===== Next webinar =====
-** Wednesday April 13, 2022 at 10:30AM EDT**
+To be announced soon!
+===== Past webinars =====
+** April 25, 2024 **
+**Title: Reconstructing the horizontal movement of genes using Bayesian phylogenetic network inference**
+by **Nicola F. Müller** (University of California San Francisco).
+Read the summary : [[https://www.iscb.org/cms_addon/academy/history?year=2024#133]]
+Read the article : [[https://www.nature.com/articles/s41467-022-31749-8]]
+Watch the webinar : [[https://www.youtube.com/watch?v=8HbYg6ki5cg]]
+--------------------
+** November 10, 2023 **
+**Title: Phylogenetic network estimation from site patterns using composite likelihood**
+by **Sungsik Kong** (University of Wisconsin-Madison).
+Read the summary : [[https://www.iscb.org/cms_addon/academy/history?year=2023#124]]
+Read the article : [[https://academic.oup.com/sysbio/advance-article/doi/10.1093/sysbio/syae054/7817714]]
+Watch the webinar : [[https://www.youtube.com/watch?v=OONdZfSLh0A]]
+--------------------
+** Tuesday  April 11, 2023 at 10:30AM EDT**
+**Title: Machine learning enables prediction of metabolic system evolution in bacteria**
+by **Naoki Konno** (University of Tokyo).
+Read the summary : [[https://www.iscb.org/cms_addon/academy/history?year=2023#102]]
+Read the article : https://www.science.org/doi/full/10.1126/sciadv.adc9130
+Watch the webinar : https://www.youtube.com/watch?v=16aRqv15bOI
+--------------------
+** Tuesday November 1, 2022 at 10:30AM EDT**
+**Title: Accurate Identification of Transcription Regulatory Sequences and Genes in Coronaviruses**
+by **Mohammed El-Kebir** (University of illinois).
+Read the summary : [[https://www.iscb.org/cms_addon/academy/history?year=2022#84]]
+Read the article : https://academic.oup.com/mbe/article/39/7/msac133/6608352
+Watch the webinar : https://www.youtube.com/watch?v=k8YwpMmv9lE
+--------------------
+** Wednesday April 12, 2022 at 10:30AM EDT**
 **Title: Combining evolution and proteomics to discover protein complexes conserved across plants**
-by **Claire McWhite** (Priceton University)
+by **Claire McWhite** (University of Texas at Austin).
-Read the summary : [[https://www.iscb.org/iscbacademy-upcoming#mcwhite]]
+Read the summary : [[https://www.iscb.org/cms_addon/academy/history?year=2022#64]]
 Read the article : [[https://doi.org/10.1016/j.cell.2020.02.049]]
-Registration : [[https://www.iscb.org/cms_addon/registration_conference/cosi28]]
+Watch the webinar : https://www.youtube.com/watch?v=bJzCYAi1guA
+--------------------
-===== Past webinars =====
+** Tuesday November 2, 2021 at 11:00AM EDT**
-** Tuesday November 2, 2021 at 11:00AM EDT**:
 **Title: Scalable Inference of Phylogentetic Networks**
@@ Line 32: / Line 93: @@
 by **Claudia Solis-Lemus** (University of Wisconsin).
-Read the summary : [[https://www.iscb.org/iscbacademy-upcoming#solis-lemus]]
+Read the summary : [[https://www.iscb.org/cms_addon/academy/history?year=2021#49]]
 Read the articles : [[https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1005896]]; [[https://arxiv.org/abs/2010.01758]]
@@ Line 40: / Line 101: @@
 --------------------
-**Wednesday September 30, 2020 at 11:00AM EDT**:
+** Thursday January 28, 2021 at 11:00AM EDT**
+**Title: SaGePhy: A phylogenetic simulation framework for gene and subgene evolution**
+by **Soumya Kundu** (University of Connecticut).
+Read the summary : [[https://www.iscb.org/cms_addon/academy/history?year=2021#32]]
+Read the article : https://academic.oup.com/bioinformatics/article/35/18/3496/5305633
+Watch the webinar : https://www.youtube.com/watch?v=P8P_yDeInN4
+--------------------
+**Wednesday September 30, 2020 at 11:00AM EDT**
 **RAxML-NG: a fast, scalable and user-friendly tool for maximum likelihood phylogenetic inference**
@@ Line 46: / Line 121: @@
 by **Alexey Kozlov and Alexandros Stamatakis** (Heidelberg Institute for Theoretical Studies).
-Read the summary : https://www.iscb.org/iscbacademy-upcoming#kozlov
+Read the summary : https://www.iscb.org/cms_addon/academy/history?year=2020#24
 Read the article : https://academic.oup.com/bioinformatics/article/35/21/4453/5487384
@@ Line 54: / Line 129: @@
 --------------------
-**Monday August 24, 2020**:
+**Monday August 24, 2020**
 **Unravelling the mystery of orphan genes to understand the origins of genetic novelty**
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 presented by **Nikos Vakirlis** (Alexander Fleming Biomedical Sciences Research Center).
-Read the summary : https://www.iscb.org/iscbacademy-archive#vakirlis
+Read the summary : https://www.iscb.org/cms_addon/academy/history?year=2020#22
 Read the articles : https://doi.org/10.7554/eLife.53500 ; https://doi.org/10.1038/s41467-020-14500-z
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 --------------------
-**Tuesday July 7, 2020**:
+**Tuesday July 7, 2020**
 **Genetic Basis Of De Novo Appearance Of Carotenoid Ornamentation In Bare-Parts Of Canaries**
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 presented by **Malgorzata Gazda** (Universidade do Porto).
-Read the summary : https://www.iscb.org/iscbacademy-archive#gazda
+Read the summary : https://www.iscb.org/cms_addon/academy/history?year=2020#18
 Read the article : https://doi.org/10.1093/molbev/msaa006
@@ Line 82: / Line 157: @@
 --------------------
-**Friday June 12, 2020**:
+**Friday June 12, 2020**
 **Fast Coalescent-Based Computation of Local Branch Support from Quartet Frequencies**
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 presented by **Erfan Sayyari** (UCSD).
-Read the summary : https://www.iscb.org/iscbacademy-archive#sayyari
+Read the summary : https://www.iscb.org/cms_addon/academy/history?year=2020#14
 Read the article : https://doi.org/10.1093/molbev/msw079